Hi everyone,
I have been working on designing and producing de novo proteins in E. coli, but I have encountered persistent challenges with protein expression. Despite optimizing various expression conditions (different temperatures/ IPTG concentration/ auto induction vs IPTG induction), modifying the protein sequences (I have tried different designs), incorporating fluorescent proteins and peptide tags to enhance expression, and experimenting with different bacterial strains (BL21/ BL21 RPL/ T7) and vectors(pACYDuet/ pst44), one of my designed protein chains has very low to no expression. I have tried both having a promoter for each chain and having just a promoter for both chains with an RBS for each.
Note that all the generated designs are based on a design that had good expression but now have around 20 mutations (each design has a different subset of mutations).
I would appreciate any help in the matter. Thanks