I have a list of six miRNAs and I am searching for a tool that help me to test the interaction between them.
Any suggestions please! Thanks.
hi,
Try this tool
https://mirmap.ezlab.org/app/
Regards
Saurabh
What kind of values are you aiming to use to create an interaction network?
You can try cytoscape tool or R package WGCNA.
Good luck.
I have relative expression values (the fold change). Thank you Jyoti Motwani
Greetings, I have conducted in silico predictions of linear and conformational epitopes for several food-derived allergens, and I am keen to ascertain the pivotal residues involved in the...
28 October 2023 8,866 0 View
Greetings, Through my research on food allergen proteins of dietary origin, I have encountered an intriguing case where a particular protein exhibits solely linear epitopes. Surprisingly, no...
27 May 2023 2,908 0 View
26 May 2023 4,689 0 View
Both CPLEX and Gurobi are commercial optimization solvers, but is there any distinction between their performance and features? Thank u in advance
22 February 2023 3,908 3 View
My colleagues are building a self cleaning solar panel using Electrostatic waves but we are stuck on how to actually calculate the voltage needed to generate those waves and what equations we...
19 April 2021 924 2 View
I need to output some debug information but I can't get a trace file such xxx.pos.trace. I have just 3 files output : xxx.pos xxx.pos.stat xxx.xxx_events.pos The -x option on the...
28 October 2020 4,934 1 View
Hello every one, in several articles about"performance evaluation in cloud computing," authors announced that the analytical method is the most suitable for evaluating the cloud system, I want to...
22 October 2020 1,775 3 View
Accurate performance evaluation of Cloud Computing resources is a necessary prerequisite for both client and provider to ensure that quality of service parameters remain within agreed limits. For...
15 October 2020 7,089 4 View
Dear all, Greetings! Recently, I have started doing some calculations using SOC with spin-polarized (ISPIN=2), and all calculations ran successfully. But the output data files of DOS and bands...
23 April 2020 9,172 5 View
Hi, Please, is there anyone who knows how can I demonstrate p values (or asteriks of significance) on a bargraph. I need Free download softwares. Thank you.
21 February 2020 8,724 2 View
How to design VN primer to attach with universal reverse primer
05 August 2024 2,113 3 View
Hello everyone, I am currently working on miRNA- mRNA interaction study. Further, I would like to do MD simulations for the miRNA-mRNA models. For the Simulation, I have modelled this complex...
24 June 2024 3,507 2 View
Hello to everyone, I'm trying to extrtact total RNA from sEVs. I made a first experiment starting from 2x10^10 sEVs quantified by NTA but the RNA obtained was very low (under 20ng/ml) Do you have...
18 June 2024 2,799 4 View
Recently, I have been trying to quantify the expression of miRNA. I have extracted the miRNA. However, I am not clear about using the cDNA synthesis kit usually there are two kits providing by...
16 June 2024 9,722 2 View
Hello everyone, I would like to know if any of you ever tried to assess the yeld of RNA extraction with the mirVana™ miRNA Isolation Kit, without phenol from ThermoFisher. I am experincing some...
06 June 2024 5,715 4 View
The size miRNA is 89 bps and the primers I have designed (using traditional method for designing gene primers) should give an amplified product of 71 bps. But I am getting product of higher...
23 May 2024 7,570 3 View
I have a question regarding target miRNA expression after transfection with antisense miRNA (miRNA inhibitor). I understand that the expression of the target miRNA will increase after mimic...
20 May 2024 5,919 4 View
Hello. Is there any webserver where I can input a set of transcription factors, genes, and miRNAs, and it can provide me with statistical data on how TFs either activate or repress genes and...
18 May 2024 5,847 1 View
Hello all. I have recently been trying to isolate total RNA after transfection of miRNA mimics and antisense inhibitors in mammalian cells. However, the RNA isolated through the trizol method...
13 May 2024 4,935 7 View
would like to work on microRNA to detect colorectal cancer. I will use the type of microRNA type micRNA124,micro143 how I can make primer design for it and how I can choose the primer ?
07 May 2024 8,812 2 View