Which is the best tool for designing gene degenerate primers?

More Mahmoud Gholami's questions See All

Not open access journals in the field of microbiology

I want to submit my article to a journal in the field microbiology, but i want that not open access, can you recommended many journals to me?

31 December 2012 7,724 5 View

Can anyone tell me how to register a new gene of bacteria in the gene bank?

I'm doing gene sequencing in radiation resistance bacteria. Can you tell me what steps I should I follow if discovered a new gene to register this in the gene bank?

04 May 2012 6,744 9 View

Is there a specific gene for radiation resistance in Deinococcus species for screening them from other bacteria?

I and my collegues research radiation resistance in bacteria in the University of Isfahan and we need the standard strain of Deinococcus radiodurans for confirmtion of our results.

03 April 2012 3,039 8 View

Can anyone suggest a software for bioinformatic analysis of metal binding sites in metal resistance gene?

I am going to perform Bioinformatic Analysis of the Metal-Binding Protein Families and Heavy Metal Resistance.

03 April 2012 9,918 5 View

Why did the authors extrapolate a phenotype that they experimentally proved in one bacterial strain across the whole genus of the organism?

I aim to be as skeptical as possible regarding whether a pair of orthologous genes results in the same phenotype in their different but related bacterial organisms under similar environmental...

05 August 2024 6,787 4 View

Seeking Software Recommendations for SELEX NGS Data Analysis?

I am looking for software to help analyze SELEX NGS data, including alignment, sequence enrichment, and other related tasks. Can anyone recommend suitable tools or software? Best wishes, Waleed

30 July 2024 1,061 5 View

Could you try using PeptiCloud and see if it's a useful tool for biology research?

PeptiCloud (www.pepticloud.com) is a bioinformatic platform that allows researchers to organize and share their data for their projects as well as collaborate with others in one place. Through...

28 July 2024 4,762 2 View

Should the amount of DNA input used for ChIP-seq library preparation be matched between the control and experimental groups?

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Printing residues in an object in Pymol?

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Looking for a bioinformatics expert especially one who has expertise in Nanoparticles docking ?

Silver Nanoparticles docking with alpha amylase and alpha glusidase .

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How to design primers and run PCR in SerialCloner?

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How to perform the anaysis of taxonomic on raw reads from the mixed sample?

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How to search an unknown enzyme in a proteome using bioinformatics?

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What is a constant touchstone or supercomputer sims for Elizabeth Holmes?

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Yogendra Rathore

I think normally people use the gene runner for primer designing and it is free.

che omar ruhil nadirah

yup, gene runner might help you.best of luck =)

Lucia Lozano

You can try with CODEHOP, it´s a free on line software that uses protein alignments, it´s available at:

http://bioinformatics.weizmann.ac.il/blocks/codehop.html

Mahmoud Gholami

Hi everyone, thanks a lot for your response me

Debamitra Chakravorty

GeneFisher - BiBiServ

bibiserv.techfak.uni-bielefeld.de/genefisher2/