Hi.. I am currently trying to look for an enzyme in a stingless bee proteome. However the query of known enzymes of the similar function is mainly from microorganisms - yeast and bacteria. I have tried blastn using these queries against the bee genome(which is not complete either) and tried searching via blastp in the bee proteome obtained from UniProt database.
I am not sure if the method I am using is correct or not because I am very new to this. Please help :)