Which database is useful for predicting the interaction of lncRNAs and their probable mRNA?

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Joseph Miano

Do you mean microRNA interaction?

See these links for good info

http://starbase.sysu.edu.cn/mirLncRNA.php

http://www.lncipedia.org/

http://bicresources.jcbose.ac.in/zhumur/lncrbase/index_simplesearchpage.php

Murukarthick Jayakodi

To my knowledge, there is no such a database. But you may use lncTar tool to find interaction between lncRNA and mRNA.

Enayat Rajabi

Hi,

I think starBase is a good candidate for your case.

http://starbase.sysu.edu.cn/index.php

Maryam Tahmasebi Birgani

thank you all

Fredy Omar Beltrán-Anaya

HI, check this

http://www.lncrna2target.org/

luck