I have tried to stain Leishmania mitochondria with a mitotracker but I am not getting clean staining for mitochondria.
I have uses the following protocol for staining:
1) 1 micro liter of 100 micromolar mitotracker stain was added to 999 micro liter culture of leishmania.
2) Incubation at 37 degree for 15 minutes.
3) Wash the cell with serum free media.
4) incubation at 37 degree for 15 minutes.
5) Wash with 1X PBS.
6) Fix the cell with 2% PFA for 10 minutes.
7) Wash the cells with 1X PBS (2 times).
I have even checked cells before fixation but the staining was not specific to mitochondria. I am getting background staining as well.