I have sonicated my bacterial cell pellet with 0.5% sarkosyl and have a sufficient amount in soluble fraction.
In another condition, I have used 50mM each of L-Arginine and glycyl glycine in lysis buffer, in this case I got a small amount of protein in soluble fraction.
Lysis buffer : 1.50mM Tris,300mM NaCl,5mM DTT,0.5% Sarkosine
2.50mM Tris,300mM NaCl,5mM DTT,50mM Arginine and glycyl glycine.
I didn't get any protein in soluble fraction with 0.1 % of sarkosine.
Please suggest the buffer conditions from which i can proceed with purification?