Hi all. I have isolated bone marrow mesenchymal stem cells from C-57 female black mice aged ~8-10 weeks. In doing so, I have scratched the plates with the needles I use to flush out the bone marrow. As a result, the cells really like to attach inside these scratches, and I am having a lot of trouble dissociating them for harvesting. Some even still stick to the un-scratched parts of the plate.

I have tried many different "permutations" so far, but first I followed the protocol we are using (“An improved protocol for isolation and culture of mesenchymal stem cells from mouse bone marrow” by Shuo Huang, Liangliang Xu, Yuxin Sun, Tianyi Wu, Kuixing Wang, and Gang Li)":

With their protocol, I washed first two times with PBS, added 2.5 mL 0.25% Trypsin, placed in the incubator for ~2-3 min, banged the plate a little bit, added 7.5 mL medium to neutralize it, and flushed the medium several times down the plate (p-100). Many were stuck in the scratches and some even on the unscratched parts of the plate.

Then, to see if I could increase the amount of cells I could collect, I tried on my other MSCs of the same genotype in p60 plates:

So second, I first washed two times with PBS; added 1 mL 0.05% Trypsin; placed in the 37C incubator for ~5 min; banged the plate a little bit; checked them in the microscope (still many attached); placed back in the 37C incubator for another ~5 min; added 2 mL medium to neutralize it; and then flushed down the plate several times. (Note: the respective volumes might have been a little more, I just can't remember right now!)

Next, I tried the same as the 0.05% Trypsin, but with using Trypsin LE, which is supposedly gentler on the cells. There wasn't much of a difference.

And finally, I washed first two times with PBS, added 1 mL 0.25% Trypsin, placed in the incubator for ~3.5 min, banged the plate a little bit, checked them in the microscope (still some attached), placed back in the incubator for another ~1.5 min, then added 2 mL medium to neutralize it, and flushed the plate. This seemed to work the best out of my attempts, but still, many were attached to the scratches, and some on other areas of the plate too.

So what am I doing wrong? My cells seem to become confluent enough for passaging after ~13 days. Should I passage them sooner for the first time? Should I pre-warm the trypsin? Should I do a high concentration trypsin wash (on and off), and then leave them in a lower concentration trypsin in the incubator for a few minutes? Has anyone experienced this problem too? I'm running out of ideas. Thanks for your help in advance!

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