I am working on identifying QTLs regarding rice appearance and grain quality. I have identified and validated previously reported QTLs. However, I was concerning, if there any specific software or database or website where i can search or track already existing QTLs in rice and identify if my QTL is novel.
will really appreciate if somebody could comment about it.
Thanks
Hi Fahad,
You can use GRAMENE database. Here is the website link:
https://archive.gramene.org/qtl/
Good luck
You can go through following databases (including GRAMENE)
QTARO: http://qtaro.abr.affrc.go.jp/
RiceQTLPro: an integrated database for quantitative trait loci marker mapping in rice plant
Hi, if you have used different markers (what kind of markers and how many have been used?) you are bound to get new QTLs. If it is validation of previously reported/known markers, you may or may not end up with the same results as your genetic material could be new. If your material is new and your markers are also new, there could be a possibility of getting new QTLs.
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