Pharmacophore modelling servers?

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Alireza Mohebbi

Yes, there are several other free software and servers available for pharmacophore modeling based on ligands. Some of them are:

LigandScout: It is a commercial software but offers a free trial version for academic purposes. It provides various tools for pharmacophore modeling, virtual screening, and ligand-based design.

MOE (Molecular Operating Environment): It is a commercial software but offers a free trial version for academic purposes. It provides a wide range of tools for molecular modeling, including pharmacophore modeling.

Open3DALIGN: It is a free web-based server that performs ligand-based alignment and pharmacophore modeling. It uses the 3D structural information of ligands to generate a pharmacophore model.

PHASE: It is a free software from Schrödinger that performs ligand-based pharmacophore modeling. It generates a pharmacophore model based on the 3D structure of ligands and their biological activities.

GUSAR: It is a free web-based server that performs ligand-based pharmacophore modeling. It uses a fuzzy logic algorithm to generate a pharmacophore model based on the 3D structure of ligands.