I use the following method to wash my inclusion bodies: 8 steps.

1: Troton, EDTA, Tris and Fresh DTT (3 Times)

2: Doc, EDTA, Tris and Fresh DTT (3 Times)

3: PBS

4: Water

I use this method for 3 different recombinant proteins. In 2 of them, host proteins were removed up to 90% during washing. But in the third case, a very small amount of host protein is removed and I have a lot of impurities.

Can someone tell me that

Do I need to change the concentrations of the compounds in the washing buffers?

Do I need to choose another method?

Choosing an IB washing method depends on what factors?

Thanks a lot.

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