I use the following method to wash my inclusion bodies: 8 steps.
1: Troton, EDTA, Tris and Fresh DTT (3 Times)
2: Doc, EDTA, Tris and Fresh DTT (3 Times)
3: PBS
4: Water
I use this method for 3 different recombinant proteins. In 2 of them, host proteins were removed up to 90% during washing. But in the third case, a very small amount of host protein is removed and I have a lot of impurities.
Can someone tell me that
Do I need to change the concentrations of the compounds in the washing buffers?
Do I need to choose another method?
Choosing an IB washing method depends on what factors?
Thanks a lot.