I am working with 70 genotypes of Blueberry. I have using SSR primers for diversity analysis. And with the same genotype i am estimated Total Phenolics (TPC), Total Flavanoids (TFC) and Antioxidant Activity (DPPH method). I am wondering if there is any statistical tool or software that can correlate both of them. If do please explain and/or share software/tool link or any publication that explains that.
Thank You !
I congratulate you on the hard work, but I have not met with such a program yet.
Look pearson correlation is the easiest choice for you to correlate your assay findings and careful and properly executed experiments would lead you significant correlation between phenolic constituents and antioxidant characters
Thank You Priyankar and Muhhammad !!
Thank You Alzbeta, I appreciate that !
Hi
If you are having the data of the SSR along with data set on any quality attribute then you can relate them, however, there are some conditions needed to be defined. Moreover, you can use step wise multiple regression analysis (stepwise MRA) for finding the associated alleles (SSR markers) with these traits. Beauty of this method is lie with the fact that it step by step build the regression model by adding the most significant markers associated with traits and deleting the nonsignificant in a relation. Please go through following publication for more details
1. Identification of ISSR markers associated with valerenic acid content and antioxidant activity in Valeriana jatamansi Jones in the West Himalaya
2. Population Genetic Structure and Marker Trait Associations Using Morphological, Phytochemical and Molecular Parameters in Habenaria edgeworthii—a Threatened Medicinal Orchid of West Himalaya, India
Hope this will help you.
Best
Arun
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