I am wondering why some loci on chrX in (hemizygous) males are called heterozygous. Is this a quality issue or due to those genes mapping to PARs?

Klaas Wierenga @Klaas_Wierenga

12 December 2012 0 9K Report

I could imagine that a SNP on X in males would be called ref/ref or alt/alt, but not ref/alt...

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