How to Use bedops to generate a BED file of regulatory regions of genes ?

30 October 2017 0 2K Report

I have list of 1800 zebrafish genes. I want to know the transcription factors which target these genes. How to Use BEDOPS bedops to generate a BED file of regulatory regions of genes (like a 5kb region upstream of TSS, say).

Or any other method to follow.

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