For some of my proteins, active site residues are not mentioned in the literature. So I looked into some online tools which generated more than 10 active site residues. Is it okay to use those residues for site-specific docking?
Deepasree K. check this tutorial
https://github.com/Valdes-Tresanco-MS/AMDock-win/wiki/4.2.4-Automatic-mode-using-AutoDock-Vina
Deepasree K. Hi
Hope you will be ok
You can use prosite and CASTp servers for identifying active site, these are reported servers and sites in your articles.
Thank you for the information. Mario E. Valdés-Tresanco , Waseem Ahmad Ansari and Maysaa Alakbaree
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