I have learnt to import KEGG pathways to cytoscape and merge the pathways without any edits. but I want to differentiate the nodes of each pathways with different colour to understand the pathways of particular gene or molecule. when I try to merge the pathways after editing, only the source data is getting merged not the edited one. could someone please guide me with tips to merging the edited pathways in cytoscape ? THANK YOU.

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