How to find antigenicity of a protein ? any particular software?

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Biswapriya Biswavas Misra

Hello, if you reply of in silico prediction tools for leads (rather than literature on TNF alpha a specific source), then the following would help.

There are several you can find on line:

1. http://imed.med.ucm.es/Tools/antigenic.pl

2. http://sysbio.unl.edu/SVMTriP/prediction.php

3. http://tools.immuneepitope.org/tools/bcell/iedb_input

4. http://bioinformatics.org/JaMBW/3/1/7/

But, I have always successfully used:http://www.imtech.res.in/raghava/lbtope/protein.php

Thanks,

Biswa

Mohsen Sarikhani

thank you