I am currently comparing ULBP-4 expression in cancer cells. The method I used for qPCR as follow:
a) cDNA synthesis = 1ug of RNA in 20ul
b) I diluted the cDNA 10X prior to qPCR
c) I used 4ul of diluted cDNA, the final concentration of primers (F/R) is 100nM, total reaction volume is 20ul
Result:
a) Average Ct value: 29
b) Average melting point (from melt curve): 75C (I believe this is the melting point of primer dimers)
How can I improve my technique to produce reliable results?