Also, you can manage the orientation of aorta in OCT embedded blocks. First solidify a thin layer (2-3 mm) of OCT in the mold using dry ice. Then place the aorta horizontally on the solidified layer. It will stick to the initial layer of OCT. Then add more OCT above the aorta and let it solidify on dry ice.
Now you have aorta in single perfect orientation. By rotating the block on cryostat, you can have sagital and well as cross-sections.
The rat aorta is very thin/fine. While embedding your aorta, make sure that you will be geting a perfect cross sections. You have very little control of the orrientation of frozen tissue. I would suggest working with FFPE tissue. After fixation and infiltration with paraffin your aorta will become hard and easy to embed few peeces in the same block. You can get a pretty good average from measuring the diameters on H&E stained slides.
Also, you can manage the orientation of aorta in OCT embedded blocks. First solidify a thin layer (2-3 mm) of OCT in the mold using dry ice. Then place the aorta horizontally on the solidified layer. It will stick to the initial layer of OCT. Then add more OCT above the aorta and let it solidify on dry ice.
Now you have aorta in single perfect orientation. By rotating the block on cryostat, you can have sagital and well as cross-sections.