During my analysis, I observed that genomic position 77 is annotated with gene symbols F, M, NP, and P across various transcripts. Please find the example below.
I used the gff3 file from NCBI https://www.ncbi.nlm.nih.gov/nuccore/AF077761 for variant annotation that includes details about gene symbols and transcript types. But I'm not sure what it means biologically to have different gene types at the same position. Does anyone have an idea on this? Please shower some ideas.
For example
NODE_30_length_153_cov_24.473684_77_-/C NODE_30_length_153_cov_24.473684:76-77 C gene-F rna-F Transcript upstream_gene_variant - NODE_30_length_153_cov_24.473684_77_-/C NODE_30_length_153_cov_24.473684:76-77 C gene-M rna-M Transcript upstream_gene_variant - NODE_30_length_153_cov_24.473684_77_-/C NODE_30_length_153_cov_24.473684:76-77 C gene-NP rna-NP Transcript 5_prime_UTR_variant 21-22 NODE_30_length_153_cov_24.473684_77_-/C NODE_30_length_153_cov_24.473684:76-77 C gene-P rna-P Transcript upstream_gene_variant -