Hi,
I would like to observe my docking results on my protein. However, i would like to see if my ligand have bound to the surface of interest. Therefore, I want to color this specific aminoacids on my protein.
There is an tool called Name selection under selection dropdown menu, however it did not work after i saved my structure as .mol2.
I dont wan to select my spesific sequences manually at everytime i try to see my results.
Please help me
Tunc
Just use 2D labels utility and save the session as file.py. Next time Your session will open exactly same.
Dear Vikash,
Thank you for your response. I realised since this labelling is 2D, It does not move with the model thus my sites of interest gets labeled wrong. Can I do this same labeling in 3d( with moving with the model)? Is it possible ?
Thank you very much!
If you like you can also try PyMol for this. In this tool you can select your sequence of interest, color it and save it as : File -> Save session as -> Filename. Next time JUST OPEN THE SESSION WITH PYMOL.
Hope this may help
Aditya
Dear Aditya
Thank you for your response. I did exactly the same thing you told me but in chimera. It also worked. Thank you guys both
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