In Molecular Dynamics Simulation, how do I make changes to the force field according to my protein?

Hi In Molecular Dynamics Simulation, how do I make changes to the force field according to my protein? I got this error in the add-ion stage: Fatal error "./ amber99sb-ildn-HHH.ff / force...

01 March 2021 8,747 4 View

How can I represent SDS-PAGE results for machine learning analysis?

I am trying to classify and analyze the results of an SDS-PAGE based array for bacterial detection using machine learning, but I have trouble finding the best way to represent the results with...

27 February 2021 9,176 3 View

Does RNAiMAX transfection reagent work in serum free medium?

I diluted siRNA and RNAiMAX in opti-MEM and added to the cells which they were in the growth medium. Is it a right way? or should I culture cells in the opti-MEM medium for a while and not in...

26 February 2021 10,041 3 View

Why CNN algorithm performs well in Network Intrusion Detection based on some recent resources?

Most of the papers have compared different hyperparameters such as layers, initializers, activation function, and optimizer algorithm in the CNN algorithm for detecting network intrusion. This is...

24 February 2021 4,578 4 View

Historical wind data/map?

Hello All, I am looking for the historical wind data/map (mainly the year 2020-2021). I would like to look at the wind value and direction for the specifics locations within the US for the...

18 February 2021 9,543 4 View

How do I change g/l into mM for bacto agar. I am trying to get the millimolar content of sodium and chloride percentage in bacto agar. How do I do it?

I am doing a salt tolerance-related experiment and for that I need to relate my salt levels to that in bacto agar. I don't want my salt concentrations to increase due to already salt content...

09 February 2021 4,158 1 View

The reason of PMMA channels cracking?

07 February 2021 3,663 2 View

Transformation into the Stbl3 chemo competent cells?

03 February 2021 1,111 5 View

How to solve failure of Fluent calculation (Error: floating point exception / Error Object: #f)?

Hi everybody I'm stuck with this error and I dont know what to do to solve this problem Initialization is ok but when I start my calculation this error appears (Error: floating point exception /...

25 January 2021 8,091 3 View

How to best prepare cells for FACS from live tissue?

Hi everyone, I'm currently trying to perform single cell RNA seq on a small (

24 January 2021 9,804 2 View

How to open an old ".MTS" file containing spectroscopic data?

Hi supreme hive-mind of the internet, we have some old *.MTS files that are supposed to contain spectroscopic data, probably some coordinates and a long list of single line spectra. Basically,...

16 February 2021 9,385 2 View

Can you use MTS assay with cells cultured in media containing phenol red?

I am trying to run a cell viability assay with LN229, but these cells are cultured in DMEM which contain phenol red. Is the MTS assay sensitive to the additional of phenol red in the media? If so,...

03 February 2021 9,478 2 View

Can I modify beginning of pelB/ompA tag as described?

Hello all, I am currently trying to modify my plasmids so that it has a sequence coding the pelB or ompA tag in front of the proteins. The problem is that in order to paste such a sequence into...

25 November 2020 8,386 3 View

Question on ELISA logistics with modified targets?

So, I am unable to find a direct answer but essentially I want to use an ELISA protocol to measure the amount of ubiquitylated histone H2A in my mutant cells. I was wondering if I could get a kit...

02 November 2020 6,761 2 View

Poly ICLC or Poly IC structure for docking ?

I want to do docking of Poly ICLC with protein. But, unfortunately there is no crystal structure for Poly ICLC or poly IC. Poly ICLC is a complex of Poly IC, poly lysine, and...

24 September 2020 6,107 1 View

Why this HPLC data show negative peak?

Lysine was dissolved in mobile phase and injected in HPLC but there are two peaks. One for positive at 2.1 min and another for negative at 2.8 min? Contents of moilbe phase are ACN:Water:TFA =...

08 July 2020 2,695 13 View

What is the best way to approach building a custom polypeptide?

I am trying to build a custom poly peptide that is ~50 amino acids in length, and it will ideally have a charge of ~+4 at pH 7. I can get the positively charged attributes from incorporating a...

08 December 2019 3,597 1 View

Uneven poly-d-lysine coating/crystallization?

I've encountered problem with large but scarce PDL crystals and spotted coating after 1hr of 0.02mg/ml PDL in PBS incubation, PBS washed and dried. Previous coating from same PDL stock resulted in...

10 November 2019 5,272 2 View

Uneven poly-d-lysine coating/crystallization?

I've encountered problem with large but scarce PDL crystals and spotted coating after 1hr of 0.02mg/ml PDL in PBS incubation, PBS washed and dried. Previous coating from same PDL stock resulted in...

04 November 2019 3,332 2 View

How I can attach oocytes on plate for doing Patch Clamp?

Hi. I want to do patch clamp on mouse oocyte. I have used poly L-lysine and either matrigel but no attachment was observed. Anybody knows another solution?

09 October 2019 2,371 3 View