I am trying to amplify the TGA1 (Transcription factor 1 ) of Arabidopsis ,which is 1107 bp. I have treated the plants with Salycylic solution over night and extracted the RNA and make cDNA. I checked both my treated and untreated cDNA with Actin primers and other two 411bp desired amplification, which looks the cDNAs are okay.I have tried with Go Taq polymearse, Phusion polymearase and Q5 polymearse., But I am not getting any results. I am trying to do the gateway cloning , so I have tried with attb sites and also with only gene specific primers. I have failed each with those. So, any suggestions regarding this will be highly appreciated. Thanks.