Hello, ResearchGate community,
I am currently working on analyzing microarray data using the limma package in R. Specifically, I am using the intraspotCorrelation function for separate channel analysis of two-color data. However, I have encountered an issue with the following warning messages:
Warning messages:
1: In remlscore(y, X, Z) : reml: Max iterations exceeded
2: In remlscore(y, X, Z) : reml: Max iterations exceeded
The analysis involves a design matrix (designp) and an MAList object (RG)
The warning messages occur when executing the following command:
corfit