In our setting, we have only one set of equipment's for molecular work which was given for viral gene detection; shall I use the same equipment's in same molecular biology laboratory for the detection of bacterial genes?

My colleagues says, it possess high level of contamination risk! but I presume either bacteria or virus, we are going to work with nucleic acids (DNA/RNA) - hence there should not be any issue in handling bacterial DNA.

Any suggestions in this regard would be greatly helpful for us.

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