i'm trying to do the protein and ligand (cyclic pepide) docking using pyrx. after loading i'm not able to do forward in pyrx window.
is any other way to do it or any other software for do the cyclic peptide and protein docking?
may i know why the forward mark is disabled.
Jobin Thomas
How big is your peptide??
Maybe the software isn't considering it as a ligand.
If possible, share the files.
Regards
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Abirami Arunachalam
Thank you.....
its a small peptide only, containing 7-10 amino acids.
yes that software is not considering its a ligand. may i know why its not considering (due to the cyclic structure)?
and is there any other software to do the docking?
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