.
Dear, i dont know if that help you:
1- http://www.wenmr.eu/wenmr/3d-dart-user-manual
2- http://genecodes.com/?referrer=Google_AF-D_DNA_soft&gclid=CPfmoZjbqq8CFYe_zAodUEWDZQ
3- http://www1.bbiq.jp/zzzfelis/Facio.html
Google cadnano
Pymol?
Ncbi
COOT
Http://w3dna.rutgers.edu/rebuild/regseq
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