I have a set of RM series SSR markers of rice (nearly 100 in number) and I wish to check:
1. Their position in the genome at a single go (preferably with graphical output)
2. If any of these markers a located within genic region or close to genic region (most important)
It will be a great help if any body can suggest any software for these.
Besides, I also want to download the exact physical locus of all the rice genes (having MSU ID). How can I do that?