Toddy (Palmyrah wine/palm wine) is said to be the culprit of hepatic amoebiasis in Northern sri lanka. But nobody has isolated amoeba from palm wine.
Hi following links may be useful to you.
http://www.tropicalparasitology.org/article.asp?issn=2229-5070;year=2014;volume=4;issue=2;spage=90;epage=95;aulast=Parija
http://link.springer.com/article/10.1007%2Fs004360050326
http://cmr.asm.org/content/20/3/511.full
Thanks Christy for that link.
If you just want to isolate DNA you could probably pellet it by centrifuge and extract from the wine. You could even use DNA binding dyes to show that the DNA was from intact cells instead of debris.
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