I am running a WCX method with wide pH range for one of the fusion protein I am working on. The buffers I am using are:
MPA: 3mM (Acetic Acid, MES, HEPES, AMPSO, CAPS), 20mM NaCl
MPB: 3mM (1-Methylpiperazine, Pyridine, Bis-Tris Propane, AMP, Piperidine), 20mM Nacl
With this buffer combination I am getting blank buffer peaks at 214 and 280nm, which is mainly due to MPB. Has anyone observed this pattern with these reagents?