can anyone suggest me the best pcr conditions for 16s 27F and 1392R primers as I am getting multiple bands. I have thermo as well as genetix pcr master mix.
The PCR conditions which I have used were 5 min at 94 °C, 35 cycles of the 30s at 94 °C, 30s at 55°C, and 90s at 72 °C, followed by 10 min at 72 °C. Amplification was carried out by using a 9700 Thermocycler (ABI).
I had used this PCR conditions: 5 min at 94 °C, 35 cycles of the 1 min at 94 °C, 1 min at 55°C, and 1 min at 72 °C, followed by 10 min at 72 °C using exTEN master mix and Bio-Rad PCR