(Bacterial) Small RNA Database

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Idrissa Diallo

Hi Robin.

I have not yet get an answer about the question.. but someone suggests me :

1) RFAM database (EMBL EBI) (my final choice)

http://rfam.xfam.org/

2) sRNATarbase (for sRNA targets)

http://ccb1.bmi.ac.cn/srnatarbase/index.php

3) SRD (a compilation of all the small size RNA sequences available to date, including nuclear, nucleolar, cytoplasmic and mitochondria small RNAs from eukaryotic organisms and small RNAs from prokaryotic cells as well as viruses)

https://academic.oup.com/nar/article/26/1/160/2376813/Small-RNA-Database

keep me update if you find something.

Thank you.

An Ngoc NGUYEN

Hello,

You can also check this site for a few more

https://omictools.com/bacterial-srna-data-category

Cheers

Olatz Ruiz‐Larrabeiti

Hello! I am trying to access the updated version of srnatarbase 3.0 without success, does anybody know if this database is running?

Thanks in advance!