As ethidium bromide is carcinogenic. Is there any alternative chemical for Ethidium bromide for the detection of DNA in Agarose gel which is non carcinogenic and safe to use ?
There is little actual evidence that EtBr is carcinogenic but on that basis it is widely believed to be mutagenic. EtBr is used in cattle to treat trypanosome infections. There are many ( more expensive) alternatives like gelred and sybrsafe which are chemically similar to EtBr but their larger size makes it difficult for them to cross the cell membrane so they are supposedly safer. The link below may be of interest
Fluorescent tags such as thiazole orange dimer (TOTO), SYBR®, Diamond™ Nucleic Acid Dye have been previously reported in studies as providing good visualizing of DNA in gel electrophoresis similar to EtBr and also report to be lesser mutagenic and lesser carcinogenic. Whatever the dye you use, it is better to take safety precautions when handling it because all these alternatives are also not 100% safe.
"Gel Red" is a common intercalating fluorescent dye which is enough to add to gel as you prepare. It is more safe and less harmfull, although there isnt enough evidence to show EtBr toxicosity.
DNA safe Stain is a new nucleic acid stain which can be used as a safer alternative to the traditional ethidium bromide stain for detecting nucleic acid in agarose gels. It is as sensitive as Ethidium bromide and can be used exactly the same way in agarose gel electrophoresis
Dear Vinay Mohan Kandpal thank you for your very interesting technical question. As already mentioned by Paul Rutland the question if ethidium bromide is mutagenic / carcinogenic is rather controversial. It is certainly toxic in high concentrations, and it is thus advisable to wear nitrile rubber gloves when working with this dye. It has been shown that ethidium bromide can penetrate normal disposable latex gloves and is then resorbed by the skin.
Here is an article in which the potential dangers of ethidium bromide are highlighted. The author also suggests to use alternatives:
Dear Vinay Mohan Kandpal I agree with Danial Shokouhi and Abdoul Razack Sare in that "GelRed" is a suitable less mutagenic alternative to ethidium bromide. It should be noted that GelRed® is a commercial DNA stain which is manufactured by Biotium company. It is already listed in the overview of possible alternatives provided by Paul Rutland. GelRed® is being advertised to be the most safe, sensitive and robust nucleic acid gel stain which is also less mutagenic than ethidium bromide, but more stable upon storage. For some additional information please have a look at the following link:
GoldView™ is a type of nucleic acid dye that can replace ethidium bromide (EB). i am using this dye for bacterial DNA detection. For more details please visit following link http://www.coolaber.com/Product_Detail.asp?Column_ID=50879&P_ID=4762