Which is the most suitable protein extraction buffer for zebra fish brain tissue?

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Yanqing Liu

Usually, you can use the universal RIPA buffer. Here is my protocol.

https://www.protocols.io/view/Whole-protein-extraction-from-tissues-dkx4xm

Matthew Sobo

It will depend on your downstream application. 2 examples,

RIPA buffers are good, but you will pull different amounts of protein from the nucleus/DNA bound based on your salt concentration (which will be nice for westerns).

A CHAPS buffer is a mild buffer than can maintain some enzymatic activity (don't expect too much nuclear proteins though).