I have 10 pre-processed studies for which I have prepared ASV tables, Taxa tables, Metadata, and phylogenetic trees. Now I want to merge these studies and create and single or merged phyloseq object to do further downstream processing.

ASV tables, Taxa tables, Metadata - these are the CSV files while tree is in text format.

# Load required libraries

library(phyloseq)

library("ape")

# Function to load metadata files from a folder

load_metadata_files

More Saesha Verma's questions See All
Similar questions and discussions