I have sequenced few exons of in both test samples and control. I have got few SNP and now I need to find genetic association. Can anyone suggest me what is the way to do so?
What is the minimum number of samples required for SNP analysis?
Hi,
To predict the deleterious effect you can try the below link it will be very useful.
https://www.researchgate.net/post/What_is_the_best_software_for_the_prediction_of_mutation
online free software Galaxy Use ( https://usegalaxy.org )
you should use UCSC table Brawser
SNPdetector, PolyPhred, PolyPhen-2, and many more.
wANNOVAR (http://wannovar.wglab.org/)
You may have a try with this online tool: http://analysis.bio-x.cn/
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