Fatal error when using pdbgmx to run NRAS bound with GTP using GROMACS 4.6.7?

I have tried to run simulation for protein complex of NRAS(5UHV) bound with Mg and GTP. However I have encountered the following error while using pdb2gmx: Program pdb2gmx, VERSION...

18 December 2019 2,246 3 View

How to get vehicle count and dataset from any one Toll plaza in India, or my research?

I wish to collect real time traffic in India. Is it feasible to get such data through any toll gate ?

04 May 2019 8,521 3 View

What is the best method to mass rear rice yellow stem borer?

Dear delegates I wish to get some information on rearing techniques of rice yellow stem borer. I started doing the same on natural host. But i face difficult and also feel cumbersome in doing mass...

02 July 2017 9,959 25 View

How to solve mixed level design in Minitab 17?

To Solve mixed level design with 3 factors and factor 1(6 level), factor 2(5level), factor3(4-level), I have used Minitab general design Full factorial -with 2 replications, totally 240...

01 February 2017 9,282 9 View

What is the standard method to perform insilico mutagenesis?

28 July 2015 9,677 4 View

What is the importance of the shape and size of the simulation box in a molecular dynamic simulation?

13 May 2015 2,676 4 View

How to extract DNA from Aspergillus spp. grown on solid medium?

Protocol for DNA extraction

11 July 2013 478 6 View

Physics: Why do we describe light by referring to its wavelength, but microwaves and radar pulses by referring to their frequency?

In physics, the description of the properties of light generally refers to its wavelength (nm), while in the range of microwaves and radio waves we refer to the frequency of a signal (e.g. kHz or...

03 March 2021 1,682 3 View

Is there any effect of different colours of light (white, red, yellow, blue etc.) on the rate of photosynthesis? If yes, why?

Light is inevitable for the process of photosynthesis reaction. Naturally sunlight plays the vital role for this process. Light may be of different colours like white, red, yellow, blue etc....

02 March 2021 7,890 2 View

Discrete Phase model (DPM) particle break-up has particle size limits during particle tracking?

Hello, I am currently working on simulating water droplet partciles in a closed room. When I use uniform particles, without "particle break-up", I can carry out the simulation without any problem....

02 March 2021 3,053 2 View

Distribution of particles in metal matrix?

How would define the "good" and "poor" distribution of particles within the matrix. Is there a quantitative solution to assess the distribution of the particles, which then having denotation of...

28 February 2021 7,397 8 View

Is there a deep reason for using the squared modulus of the wave function as the probability density of the existence of the particle?

I think we were all surprised at the first time we got to know quantum mechanics that the squared modulus of the wave function is the probability density of the existence of the particle? The role...

28 February 2021 6,282 9 View

In an eye with Tyndall, does each dot correspond to an individual cell?

When you observe the presence of Tyndall in an inflamed eye: Does each of the small floating dots correspond to an individual cell or to an aggregate of cells? Does a conventional slit lamp have...

27 February 2021 6,326 2 View

What could be reason for getting such type of graph for complex impedance in case of polymer blend films?

Its effect appears in real part of ac conductivity also. Can anyone suggest any reason behind it?

26 February 2021 3,487 3 View

Zno nano particles colour changed from white to grey in process of calcination any suggestions?

In the formation of Zno nano particles process, after drying at 120 degree C, my zno nano particles are completely white but when i calcine it for 450 degree C it converts into grey colour. i...

26 February 2021 2,435 4 View

Why there are two peaks while using the mie plot of Silver nanoparticle?

Hi, I am trying to learn the theoretical modelling of silver nanoparticle using the Mie scattering theory. After that, I discovered a software named Mieplot developed by Philip Laven, where it...

25 February 2021 7,493 6 View

How can I obtain time series data by country on night-time light (brightness) ?

Hi everyone, Please, how can I obtain time series data by country on night-time light (brightness) ? I've tried, but so far all I can find are maps. I am looking for numerical data, especially in...

24 February 2021 8,625 4 View