What is the simplest, user friendly but very reliable gene recombination detection software?

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Does anyone know any online database which has all organisms classified based on whether they are intracellular or extracellular organisms?

I need to carry out classification of some bacterial pathogens based on whether they are extra- or intra- cellular.

06 July 2016 3,353 4 View

Can anyone help with analysis using TreeMap or Dendroscope to construct Tanglegrams?

I need some assistance to address an issue concerning host switch events.

09 October 2015 4,062 1 View

Is the term 'time to the most recent common ancestor' the same as 'time of the most recent common ancestor'? Can they be used interchangeably?

I was just wondering if both refer to the same concept and can be used interchangeably.

09 October 2015 6,516 0 View

What does the 't' or 'T' stand for in 'tMCRA' or 'TMRCA'? Do they represent the same thing?

I have come across tMRCA and TMRCA, I have also come across expressions like: 'time of tMRCA'. When I enquired about 'time of tMRCA', I was told it meant 'time of the Most Recent Common Ancestor'...

09 October 2015 8,798 0 View

How can we achieve better peace and security in the world?

What are some of the innovative and practical ways the world as whole can achieve peace and security aside the steps the UN has undertaken over the past years after the second world war? It seems...

01 February 2015 8,950 2 View

How do I get the age range (95% HPD) displayed at each node of an MCC tree in Figtree?

I have a maximum clade credibility tree drawn and I am trying to get the age range at each node but I don't seem to get it right. How do I get that? I have the node bars displayed but I need the...

11 December 2014 4,837 8 View

Can anyone suggest any other software apart from MEGA6 which I can use to draw a maximum likelihood tree?

The process is slow in MEGA so I was wondering if there is a software that is faster.

07 August 2014 9,977 5 View

Does anyone have an idea about how I can determine whether a gene reassortment event occured in the recent or distant past?

I want to be able to tell when a gene reassortment event (observed after DNA sequencing of genes of pathogens) occured.

05 June 2014 4,499 2 View

How reliable is the MAFFT online sequence multiple alignment program?

I have lots of sequences to align and I used to use MEGA6 but it takes forever to finish one multiple alignment session. I need a faster and a more accurate way of obtaining my multiple alignments.

05 June 2014 8,009 6 View

How can I get more than 100 hits when I do a nucleotide BLAST at the NCBI website?

I need to retrieve about 1000 hits from the GenBank to use for my analysis.

05 June 2014 6,692 4 View

How to learn more about SPSS and its Application?

I would like to learn more about SPSS and Its application especially in regards to data analysis. Please suggest me how I can learn more about it. Thank you so much.

11 August 2024 9,101 4 View

Can I base on reverse DNA sequences to perform alignment, convert to amino acids and GenBank submission?

I have reverse sequences (AB1 format), can I base on reverse DNA sequences to perform nucleotide alignment, convert nucleotides to amino acids and deposit the sequence in GenBank database?

11 August 2024 5,138 1 View

Baseline drift in HPLC? What causes this?

Hello, Why do i see this baseline drift when i compare my blank (black) to the sample (blue)? Any suggestions as to why this happened? Thank you!

11 August 2024 3,770 4 View

Text-Communication from the M1 Hand Area using BCI—and then there is Elon Musk?

Willett, Shenoy et al. (2021) have developed a brain computer interface (BCI) that used neural signal collected from the hand area of the motor cortex (area M1) of a paralyzed patient. The...

10 August 2024 7,180 0 View

Has anyone applied Python in the field of textile engineering for data analysis, automation, or smart textiles?

I'm currently exploring the application of Python in textile engineering, specifically in areas like data analysis, process automation, and the development of smart textiles. I'm interested in...

10 August 2024 7,429 2 View

How can I use the cif data obtained from rietveld refinement extracted via gsas2, for microstructural analysis using ETEX software?

09 August 2024 7,718 0 View

How to confirm the site-directed mutagenesis result without performing NGS?

I'm cloning a fragment of 3200 nts into plasmid. The cloning was successful, however, 02 amino acids were mutated. Now I want to fix these 02 aa by site-directed mutagenesis technique using...

08 August 2024 4,645 2 View

How are iso-frequency contours plotted?

Let's say we have a standard, regular hexagonal honeycomb with a 3-arm primitive unit cell (something like the figure attached; the figure is only representative and not drawn to scale). The...

07 August 2024 1,937 1 View

How to prepare the nanoparticle treated fungal sample for Environmental SEM analysis?

A fungal strain was treated with nanoparticles. We want to do an environmental SEM analysis. So could anyone share your views on preparing the sample? Thank you.

07 August 2024 5,307 1 View

How to normalize and take the significance of the MTT OD values with 3 replicates for the same cell-line?

Hi, I have a question about normalizing the MTT OD values for doing the statistical analysis. So, if we have 3 different plates and we call them 3 different replicates, so, first we would...

07 August 2024 8,106 4 View