What is the best biochemical modelling tool for the construction of my first model?

More Michail Georgakis's questions See All

As ESL teachers, are we overlooking the grammar-translation method's potential to enrich learners' linguistic and cultural insights?

As we witness the pendulum swing towards immersive and communication-centric strategies, it's imperative to revisit and possibly reinvigorate the role of the grammar-translation method. Its...

25 February 2024 3,932 2 View

How can citizen science enhance the development of educational materials related to cultural heritage in aquatic ecosystems?

Hi, I've incorporated the use of iNaturalist (via creating projects with the orientation of areas) in specific areas that combine outstanding natural and cultural beauty. Specifically, I developed...

21 December 2023 6,594 2 View

How can innovative approaches improve ESP and EFL education for military cadets in complex global operations?

The question above explores the critical intersection of English for Specific Purposes (ESP) and English as a Foreign Language (EFL) education within the unique context of military training for...

06 November 2023 2,040 4 View

Analyze failed in OpenSees ?

Hello, I am student of the Civil Engineering department of Aristotle University of Theassaloniki. I tried to run the analysis of the file THEMA_QUAKE.txt and i got the following reports. Could...

28 May 2021 8,478 4 View

Skin Images differences algorithm ?

I need help for the following problem. Suppose that I have two images of a patient‘s body one today and an older one a couple of years ago. The problem is: find the aerias of the skin where moles...

05 May 2019 5,805 3 View

Is there the possibility to detect a specific aminoacid sequence from proteomic data?

I am planning to LC/MS experiment to characterize the proteome of a specific biological fluid. I am mainly focused on detecting specific cleaved isoforms of my protein of interest. Is there any...

31 March 2019 9,998 3 View

What is the alternative for Illumina Tn5 transposase (ATAC-seq)?

Hi all, I recently found out that Illumina discontinued the DNA Nextera kit, replacing it with another one. As you might know, the enzyme from this kit (Tn5 transposase, TDE 15027865) is widely...

17 January 2019 8,471 48 View

Has anyone experience with polishing glass with a Struers Tegramin or similiar devices?

Which suspensions, lubricants and polishing cloths are usefull? How much time does it typically take to polish glass to get a roughness on the nanoscale?

10 January 2019 9,054 2 View

Transgenic reporter mouse line vs Immunostaining?

Dear scientific community, I faced an unexpected problem regarding the detection of a protein in the murine muscle stem cells. I am interested in a GPCR, which has a relatively low mRNA...

17 July 2018 7,426 4 View

Where will this interesting Projct be published? or Where was it already published?

Dear Authors of this interesting Project, Just this Project touches with some my published works, the main of which I must present two works: 1) Ponizovskiy M.R., (2013), Biophysical and...

28 March 2018 9,925 2 View

How can I prepare virus for a TEM or SEM imaging?

I have virus (viral hemorrhagic septicemia virus) in suspension and the experiment will not involve cells. What level of TCID50 is preferred?

11 August 2024 3,115 1 View

Handling Missing Data and Building a Predictive Model with Incomplete Information ?

I am developing a predictive model for a water supply network that involves 20 influencing points. However, I only have historical data for 10 out of these 20 points. I would like to know how to...

10 August 2024 4,005 2 View

Which Scopus Journal provides the most affordable fees?

"PUBLISHING IN A SCOPUS JOURNAL" Researchers are now at a cross road. The critical need to publish in a Scopus or ISI, etc journal is ever vital. Journal Publication fees must be submitted....

10 August 2024 8,621 1 View

Geotechnical Engineering (Proceedings of the ICE) time review?

Hello everyone, I recently submitted an article to Geotechnical Engineering (Proceedings of the ICE), and the current status has been listed as "EiC Pre-assessment: Ready" for the past 20 days. I...

10 August 2024 6,493 1 View

Seeking Advice on Viability and Execution of Undergraduate Thesis Topic?

Hello everyone, I am currently developing a thesis proposal and would appreciate your input on its viability and how to effectively carry it out. My proposed topic is: "Does the perceived threat...

10 August 2024 8,992 0 View

Is it possible to use the Fused Deposition Modeling (FDM) to additively manufacture interconnected porous structure generation of >100-200 micrometer?

Usually, additive manufacturing techniques like SEBM, SLS, and SLM are used for interconnected porous lattice structure generation with sizes of >100–200 micrometers. Can the Fused Deposition...

09 August 2024 7,892 0 View

How to define an anisotropic material with asymmetric elastic compliance/stiffness matrix in ANSYS APDL?

I need to model an anisotropic material in which the Poisson's ratio ν_12 ≠ ν_21 and so on. Therefore, the elastic compliance matrix wouldn't be a symmetric one. In ANSYS APDL, for TB,ANEL...

09 August 2024 5,048 2 View

Who will be moral responsible for the death of thousands of people in the event of an earthquake?

Who will bear moral responsibility for the deaths of thousands of people in the event of an earthquake? Weeks and months remain before the onset of strong earthquakes that bring death to...

08 August 2024 6,134 12 View

GC-MS retention index prediticon?

Hello experts, Does anyone know any free software about retention index prediction ?

08 August 2024 7,403 2 View

How can I apply boundary conditions in an orthotropic steel deck numerical model using ABAQUS software?

I am trying to simulate vehicular loading on an orthotopic steel deck bridge section in ABAQUS software. The red arrow mark in the attached figure indicates the direction in which the vehicle will...

08 August 2024 719 0 View

Tapas Palai

For biochemical modeling, COPASI software is a good one. The package has been developed specially for biochemical modeling. It is freely available and it does not requir any special configuration of computer. For further information you may visit the following website:

www.copasi.org

Michail Georgakis

thank you Tapas. I actually started using V-Cell, any Info on that?