What is best method for total DNA extraction of endophytes from plant tissue? Can i prefer CTAB method for total DNA extraction or any DNA isolation kit? If kit is best then please suggest me kit name.
Dear Pooja Singh
Pls. find the attached files and the references, good luck
Hoping this will be helpful to your project
Regards
Prof. Houda Kawas
http://library.wur.nl/WebQuery/wurpubs/fulltext/17751
http://digitalcommons.unl.edu/cgi/viewcontent.cgi?article=1039&context=plantpathpapers
https://www.ncbi.nlm.nih.gov/pubmed/22419497
https://bmcresnotes.biomedcentral.com/articles/10.1186/1756-0500-5-266
http://www.fungaldiversity.org/fdp/sfdp/33-9.pdf
http://onlinelibrary.wiley.com/doi/10.1111/j.1471-8286.2005.01044.x/abstract?systemMessage=Pay+Per+View+on+Wiley+Online+Library+will+be+unavailable+on+Saturday+15th+April+from+12%3A00-09%3A00+EDT+for+essential+maintenance.++Apologies+for+the+inconvenience.
https://academic.oup.com/treephys/article/34/5/524/1689643/Endophytic-bacteria-in-plant-tissue-culture
http://munin.uit.no/bitstream/handle/10037/5860/thesis.pdf?sequence=1
http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822012000400041
https://books.google.com/books?id=lIi9BAAAQBAJ&pg=PA49&lpg=PA49&dq=total+DNA+extraction+of+endophytes+from+plant+tissue&source=bl&ots=Hw0gfsBdjr&sig=pV2twSESFT1vjO07Fl3KRib0yzM&hl=ar&sa=X&ved=0ahUKEwisvLio9aPTAhUDjywKHSxWBZQQ6AEIcTAJ#v=onepage&q=total%20DNA%20extraction%20of%20endophytes%20from%20plant%20tissue&f=false
you can follow this https://books.google.com/books?id=l...tes%20from%20plant%20tissue&f=false
Here is some useful papers:
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3505157/
http://onlinelibrary.wiley.com/doi/10.1111/j.1471-8286.2005.01044.x/pdf
http://www.fgsc.net/fgn44/weiland.html
https://www.researchgate.net/publication/289366399_Direct_DNA_extraction_method_of_an_obligate_parasitic_fungus_from_infected_plant_tissue
Article Direct DNA extraction method of an obligate parasitic fungus...
Hi Pooja
You can read some references in attachment 1
http://downloads.hindawi.com/journals/ecam/2012/382742.pdf
2
https://treephys.oxfordjournals.org/content/early/2014/05/07/treephys.tpu027.full
3
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3769033/
4
5
https://www.sciencedirect.com/science/article/pii/S094450131300089X
6
https://www.mbl.edu/microbialdiversity/files/2012/08/mdiv2010Irizarry.pdf
7
https://digitool.library.mcgill.ca/thesisfile106473.pdf
8
https://www.pjmonline.org/wp-content/uploads/2015/12/vol5842009355.pdf
9
https://www.tandfonline.com/doi/pdf/10.1080/21501203.2012.656724
10
https://www.nrcresearchpress.com/doi/pdfplus/10.1139/m97-131?src=recsys
11
https://onlinelibrary.wiley.com/doi/10.1111/1751-7915.12291/pdf
12
https://www.academicjournals.org/journal/AJB/article-full-text-pdf/956CF8231201
13
https://journal.frontiersin.org/article/10.3389/fmicb.2016.00685/full
14
https://link.springer.com/protocol/10.1007%2F978-1-4939-6367-6_13
15
https://hub.hku.hk/bitstream/10722/53098/3/FullText.pdf
16
https://www.doiserbia.nb.rs/ft.aspx?id=0354-46641500063Y
17
https://norgenbiotek.com/product/plantfungi-dna-isolation-kit
18
https://www.fungaldiversity.org/fdp/sfdp/33-9.pdf
19
https://www.plantsjournal.com/vol3Issue2/Issue_mar_2015/2-6-11.1.pdf
20
https://www.ars.usda.gov/arsuserfiles/5818/Penicilliumspeciesendophyticincoffeeplants--Mycologia9831-42.pdf
Thank you so much for the help
You most welcome
Houda
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