Thank you for the advice Burak. I had already been on the website but it seems that we can only order SCSA Test as a patient. I'm in fact interested in the SCSA Software only, just to translate my cytograms of native vs fragmented DNA in a Total DNA Stainability vs DNA fragmentation index as required in the SCSA test.
Dr Evensons technology is a licenced agreement and so requires payment for each use. I would stick with available interpretation sorftware unless you wish to offer SCSA or SDSA (TM) comercially. In this case you would then have to apply for the licence.
The software you need to analyse your FACS results is a list-mode software. Evenson's company is one source (if you can get them to answer your inquiry). Other options are Listview from Phoenix Flow Systems, FCS Express from De Novo, and Winlist from Verity.
Hi everybody, I refresh a little bit the topic as I'm trying to figure how to analyse SCSA results with softwares different from the official SCSA-soft.
Indeed some of you gave me the advice to use FCS express, unfortunately this is not an open access soft and I only can download trial version. Thus I would like to understand exactly how the raw datas (I mean the cytograms red fluorescence vs green fluorescence) are treated to obtain 1024 x1024 cytograms or to calculate the % DFI as descibed by Evenson et al. My objective is to be able to treat these kind of data on Flowjo for example?
If I am not mistaken, you can obtain the 1024 x1024 cytograms by choosing lin mode instead of log mode (when you do the graphs). Then, you have to create for each sperm a new variable called DNI fragmentation index (DFI) by this formula: Red fluorescence/total fluorescence. I do remember using the FCS Express for this, and the math option (but I do not remember how exactly).
Thank you for your answer. I will try to find if this function is available with our analysis software. Indeed I heard about the math option on FCS express but we don't have access to full version of this soft.