I have data from SSR markers that have 2-10 bands each. I was able to run analysis wherein the program consider each band as single loci. The program gave me the following data (as in attached photo):

Band Frequency, Estimated Allele Frequency (p & q), Samples Size, No. Alleles, No. Effective Alleles, Information Index, Expected and Unbiased Expected Heterozygosity

for each band within an SSR marker. Will taking the average of the resulting value of each bands per SSR marker will give me the value of that SSR Marker? If not, may I ask what set of useful data for multi-locus binary data I can obtain in GenAlEx aside from the AMOVA?

Thank you!