I am wondering if it is possible to isolate RNA from freeze-dried human tissue in high qualitiy in such a way that RNA sequencing can be done from the samples. Does anybody have experience with that?
Freeze-drying the tissue sample is a good option for downstream analysis of RNA. How did you freeze dry your tissue, did you use a cryoprotectant like trehalose or sucrose? If you have used a cryoprotectant then you can proceed straight away with your RNA extraction by homogenizing your freeze-dried sample in TRIZOL and use chloroform and isopropyl alcohol to precipitae your RNA. Check the below-mentioned article, the principle is same for tissues.
Article Lyophilized human cells stored at room temperature preserve ...
I routinely used human heart biopsies preserved at -80ºC for RNA isolation. These RNAs can easily be used for NGS. We freeze the tissues immediately after collection in the surgery and preserved in an RNA extraction buffer with beta-mercaptoethanol.
In heart tissues preserved by this way you can easily reach RINs of around 7-8. Sequencing results are very good.
Yes you can if the sample is well preserved, I have described a manual extraction protocol using magnetic beads "Dyna Beads" with a very good performance even with less preserved molecules
Here is the link of the article.
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