I have Gene Expression Matrix file. I want to perform the KEGG pathways enrichment based on the expression values. Is there any tool for such analysis.
Try
https://www.qiagenbioinformatics.com/products/ingenuity-pathway-analysis/
or
https://omictools.com/gene-set-analysis-category check them out.
Hello Archana
I advice you use the IPA (Ingenuity Pathway Analsysi), maybe a trial could be useful for you.
Best regards
free web-tool, depending on your species, it might have it:
http://biit.cs.ut.ee/gprofiler/
Input is a list of genes, so you would need to do differential expression analysis before (in R or using tools you normally use)
You could try MapMan.
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