Often yellowing leaves in tissue culture could be due to the depletion of the contents of the nutritional medium due to the long incubation period in the same container and delaying in subculture processes.
How big were your 'plantlets' when you noticed that their leaves turned yellow? and how often did you subculture your plants? If your plantlets are small, and you subculture them every 2-3 weeks, that was about normal. Then, probably you need to direct your attention to your medium components. Did you follow a successful medium receipt from a published paper. If you are using MS medium, make sure the MS powder you purchased already have vitamins added; otherwise, you have to add it separately. There are all kinds of MS medium powder mix out there. Need to be very careful to choose them.
If plant shoots or long leaves touches to the tissue culture glass/ test tube sides, vapors or water drops formed in the bottle/ test tube causes the yellowing of leaves. It happened for my plants in rooting media.