I'm looking for some general refrences about manual investment and capital cost accounting in this model.
This is a bit out of date, but perhaps you are still interested. What are you looking for beyond the MARKAL documentation?
http://www.iea-etsap.org/web/MrklDoc-II_MARKALMACRO.pdf
I suggest you to go through ETSAP's Manuals on MARKAL. (Available on their website.) I am using AnswerTIMES.
Here you can find the description of the UK MARKAL model, very useful
https://www.ucl.ac.uk/energy-models/models/uk-markal
Regards
Article A review of MARKAL energy modeling
any references?
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