Is there any way to find gene data from patients of different survival rate

06 June 2017 1 7K Report

We usually have a target gene, and search it for survival rate with or without the gene alteration. However, is there any way to do the opposite search? i.e., from two group of patients separated by high/low survival rate, we can analyze the difference of gene expression data. Thanks.

Igor Kurochkin

If you work on cancer, you could find a plenty of data in TCGA database:

https://cancergenome.nih.gov/

Just an example of tutorial on Survival Analysis of TCGA patients integrating gene expression (RNASeq) data : https://www.biostars.org/p/153013/

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