Recently, i'm doing a sonication to bacterial pellet using PBS 10x buffer. I'm being confused in adding the buffer to the pellet for sonication. I'm setting the amplitude for 20-30%. Is there any specific volume for suspending the pellet? Thanks
For my typical large scale E.coli expression - for a cell mass of 2.5 - 2.7 grams; I use 15 mL of lysis buffer which contains Tris pH 8.0, 1 mg/mL lysozyme and 1X protease inhibitor cocktail.
For sonication, you need to find a setting that you lyse the e.coli but not too strong that will break your protein. I hope that answers your question.