How to convert a .fasta file to fastq file ?

I have a FASTA file, how can i convert it to a FASTQ file via command line or by any online converter. The existing online converter is giving error and is unable to parse my fasta file.

11 December 2018 9,878 15 View

How to construct a 5-node PPI-TF-mirna-gene regulatory network?

I have some genes known to be involved in Oral Submucous Fibrosis (OSF) progression and also their PPI network along with gene-gene interaction. I want to construct a 5-node Feed forward loop with...

09 October 2018 1,786 0 View

How to map Illumina probe set ID to Gene ID?

Is there any computational tool/software/program code to convert/map illumina probe set IDs to gene IDs for a large data file...

09 October 2017 9,777 1 View

How to extract or unzip HT_HG-U133A files for further anlysis of gene expression data?

07 August 2017 995 3 View

What is the best approach for detecting functional modules in gene expression data ?

What are some of the best approaches to find out functional modules in gene expression data .

04 May 2017 7,960 4 View

How DNA Circuits be used to stop cancer progrssion?

Can DNA Circuits be used to make nano auto triggered bombs to stop cancerous cells from growing when they come in contact with them.

08 September 2016 2,549 1 View

How to represent cancer in differential equation model ?

06 July 2016 4,655 2 View

How can Q3 accuracy of secondary structure of proteins be calculated ?

How is the Q3 accuracy or three state accuracy of secondary structure of proteins calculated. In some texts it is written that it the no. of correctly predicted secondary conformation of amino...

02 March 2016 1,055 5 View

Does drinking excess coffee prevent sleep paralysis ?

08 September 2015 5,771 4 View

How much voltage is generated in brain when synapse occurs ? Is it sufficient to light up a bulb ?

How does electrons flow from one synaptical area to another during synapse ?

08 September 2015 3,750 1 View

Can we classify HV and LV lines based on line length?

I have dataset which shows the length of power lines. I need to classify the lines based on the line length. Is there a rule to classify the High voltage (HV) and low voltage (LV) lines based on...

03 March 2021 4,116 4 View

Irradiation data for JAPAN?

Hi, Could you help me to get the latest (2019, 2020) solar resource data for a particular site in JAPAN? PV GIS and NSRDB data are not in reach to JAPAN, I'm looking for some other database for...

03 March 2021 961 3 View

How to repeat an operation on an atom selection for multiple times in PyMol?

Hi, I am trying to construct a multi-layer fibril structure from a single layer in PyMol by translating the layer along the fibril axis. For now, I am able to use the Translate command in PyMol...

02 March 2021 4,569 4 View

Is there a powerful system for the security of the systems distributed on IoT systems?

Is there a powerful system for the security of the systems distributed on IoT systems?

02 March 2021 3,858 10 View

How to define and get results (stresses) for certain points of a model in abaqus, using python? When the size of the model changes?

I want to do a parameter study of a aixsymmetric cylinder in Abaqus. I want to create several jobs where I get the stresses for 3 different points in my model. These points are defined. I wrote a...

01 March 2021 10,078 1 View

Which is suitable for use with Python? MySQL or SQL Server?

Which is suitable for use with Python? MySQL or SQL Server? What is your suggestion?

01 March 2021 3,422 3 View

Can anyone provide the Support vector regression code structure of LIBSVM MATLAB or python ?

Please, if Gaussian Parameter optimization is possible in this code structure

28 February 2021 278 3 View

How to modify Johnson cook equation in ABAQUS?

I wanted to add an extra parameter to the existing Johnson cook equation in the ABAQUS simulation. How to add those extra parameters. Ref: A modified Johnson-Cook material model with strain...

28 February 2021 4,841 3 View

What is the difference between genotype and haplotype data in the ped format?

Hi everybody In the ped format for genotype, alleles of any SNP are represented by two columns (one for each allele, separated by a space). Is a column sufficient for the haplotype to...

27 February 2021 1,965 1 View

No module named 'tensorflow.keras.backend.tensorflow_backend' ?

System Description Cuda 11.2 GeForce GTX 1080ti tensorflow version 2.4.1 keras version 2.2.0 python version 3.8 I was getting the below error when I try to run my code on the...

25 February 2021 6,673 2 View