I would like to know how to upload the data from an RNAseq to Gene Expression omnibus?

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Frederic Lepretre

Large datasets are to be uploaded in SRA from NCBI, not in GEO.

lastq and metadata files are needed, but it's well presented on the site.

fred

Mohd Akram Ansari

Sequence Read Archive (SRA) provides a tool to extract the data into fastq files. Currently, the Sequence Read Archive (SRA) stores raw data sequences from different next-generation sequencing platforms such as Illumina, Oxford nanopore technology, PacBio, etc. Sequence Read Archive (SRA) accepts binary files such as BAM, and SFF formats, and text formats such as FASTQ.

Best of Luck!!!